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Both high- and low-copy-number plasmids
commonly solve this problem by using site-specific recombination to resolve
dimers to monomers (see Fig. 4). This process involves site-specific recombinases that
bind to specific recombination sites on both monomer copies within the plasmid
dimer and form a synaptic complex in which the two recombination sites are
brought in to close proximity (55). The site-specific recombinases cleave DNA strands
within this complex and promote strand exchange between the two sites and
results in the monomerization of the plasmid dimer. The XerC and XerD
site-specific recombinases encoded by most bacterial chromosomes are involved
in the resolution of dimeric forms of many plasmids, including the ColE1
plasmid, and bacterial chromosomes (56).
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